The practice I have seen on woodworking tv shows goes like joint one edge, rip on TS 1/32" oversize, then go back to the jointer to take that 1/32" off. If the jointer isn't introducing a taper then they should still be parallel.
I don't follow that practice because I know I've got some warp on the infeed table. I can run a square down the length of the fence and it's square at the outfeed side and at the start of the infeed, but not at the infeed just in front of the cutter. I don't do anything about it at this point because a) I can't be bothered because it still makes straight edges and that's what it's supposed to do b) I don't have a straight edge long enough that I *really* trust c) I will probably end up wasting two days screwing with it and not get any better.
-Leuf