The main problem with pouring into the toilet bowl is that much of the staining is up near the top of the bowl and that much of the scale is inside in the channels that the water follows.
After having done it the correct way, and having also done it the incorrect way, I can definitely suggest what I found to be the best method.
BTW, gloves are helpful; a mask isn't really needed; and eye protection is a good idea in case you accidentally splash.
- Don't be stingy on the acid (a gallon is a good amount).
- Empty the toilet bowl of water (any way you want).
- Plastic wrap the bowl (no need for tape).
- Ventilate (a fan is enough but windows are good too).
- Pour acid slowly using a funnel (no splashes!).
- Plastic wrap the tube (no need for baggies & rubber bands).
- Wait an hour (this is the slow and easy method).
- Remove plastic & pour baking soda (it will use a lot!).
- Remove tube plastic wrap over tank tube (ask me why).
- Flush like there's no tomorrow (10 flushes is good).
- Inspect & reapply as needed.
Note: If you cup and re-use the acid, you can get away with a quarter of a gallon; but it's not worth saving the half hour or the gallon to expose yourself to more HCl fumes than you need to be exposed to (but don't expect to be fume free. If you can't talk for a few minutes, then you got way too much; but otherwise, expect a few whiffs of the stuff to the point that you immediately notice it, and you simply hold your breath and move away to breathe again until the ventilation system removes those fumes.